PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10062104g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 190aa    MW: 21401.9 Da    PI: 4.8932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10062104g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.6e-142472355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      +kG r +k +g+Wv+eIr p+    + +r++lg+++t+e+Aa a++ a  +l+g
  MA_10062104g0010 24 FKGNRMRK-WGKWVSEIRMPN----StRRIWLGSYDTPEKAACAYDFAVYCLRG 72
                      67778788.**********83....35*********************999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-272282IPR001471AP2/ERF domain
PROSITE profilePS5103220.0472380IPR001471AP2/ERF domain
CDDcd000181.41E-252382No hitNo description
SuperFamilySSF541711.37E-192382IPR016177DNA-binding domain
SMARTSM003801.5E-282386IPR001471AP2/ERF domain
PRINTSPR003674.3E-72435IPR001471AP2/ERF domain
PfamPF008472.6E-72572IPR001471AP2/ERF domain
PRINTSPR003674.3E-74662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MAKPSQNQNG HNRPENRPLK SRQFKGNRMR KWGKWVSEIR MPNSTRRIWL GSYDTPEKAA  60
CAYDFAVYCL RGSKAKFNFP HSPPEIPCAS SLSPPQIQAA AAEYAEEFPL RSKDAAFSSS  120
SSEAKCGNDG EDISAFWDSV LEDVDNGEFL TLQDFPPLDV TLQDFPPLDV PLEDFGVLYQ  180
MTENWGRGVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-132080263ATERF1
2gcc_A1e-132080263ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9S7L53e-36ERF18_ARATH; Ethylene-responsive transcription factor ERF018
TrEMBLB8LPP62e-78B8LPP6_PICSI; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-34ERF family protein